PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2DS_AD8820C42.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 229aa    MW: 24494.4 Da    PI: 11.3255
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2DS_AD8820C42.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY26.11.8e-08166185221
                            --SS-EEEEEEE--TT-SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefp 21 
                            dDg++WrKYGqK++ g+++p
  Traes_2DS_AD8820C42.1 166 DDGHSWRKYGQKDILGAKHP 185
                            7*****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508118.57160185IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.6E-7161185IPR003657WRKY domain
SuperFamilySSF1182904.45E-6164186IPR003657WRKY domain
PfamPF031063.5E-6166186IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MARLPASHHQ STTSSPAPRD REISLITCSL PSFSSANRTC SSVSAAMESV EGNGTGRGNL  60
QLVVSELCRV QELVRQLELH LHAPDASIDL CRALTAEIFA LTDRSIGFVA AAHFPDAPTT  120
PSSTSSSLSG VSDQPFRTNT KKRKATARWT SQVRVSAAGG AEGPGDDGHS WRKYGQKDIL  180
GAKHPXLLPL HPPQLAGLPR HQAGAARRPG PRALRRRLPR PAHLQANGR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ3344010.0DQ334401.1 Triticum aestivum WRKY transcription factor WRKY1B (WRKY1B) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003574419.12e-52PREDICTED: probable WRKY transcription factor 53
TrEMBLW5C7N51e-165W5C7N5_WHEAT; Uncharacterized protein
STRINGMLOC_71897.29e-83(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.22e-07WRKY family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]